Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015812152.1_cds_XP_016497020.1_11186
CDS Infomation

[gene=LOC107815888] [db_xref=GeneID:107815888] [protein=E3 ubiquitin-protein ligase MBR2-like] [protein_id=XP_016497020.1] [location=join(5935..7653,8061..8111,8366..8464,8545..8688,8785..8916)] [gbkey=CDS]
Sequence

ATGCAGGGGCGACGGAGTGCCTTCGGTTCCCTGCAAGAATCTTTAGGTTTCAATCATGGT
TCTACGTCTAGTGATGGTGGTGCAGATCAGCAGATATGCTGGAATAATGATCATGCACAA
AATCACCTGACAGATTATATGGTATCTTCTAATGAGACCAATTTTCCATTTTTCGACCCT
GTGAACCAAGAGAGACATAACGTAACCGGGTGGAGTTTAGGAGAATCCAGCTCCTCTATT
ACACCGAATTGTGCAAGTCGGAGAGAACAGAAAACAGATCATGGATGGTCATCCACGATG
ACCACTTATCCTGGACCTTCACATTTCTGTAACGAACAGCAATATGGGTCTTCTGACATT
CTATCATTGAGTAATACTGAAGAAAATTTAAGCAGCCATCGAATAGATAACAGCACTTTA
TTTTCTCAAGGTTATAGTTCTAGCACCATTCCTCATGATATCAACAGAAATCCAGTATTT
GAGGGGCACAGCGACAATAATGATGATGACGATGACTGTCAAGTGATGGAGTGTACTCCA
TACAACCCTGATAGACCAGGAAAAGAGCAAAAATCATCTGCTGCTAGTACTTCTGGAACT
AATGGATATTTGATGGATAATAGTGATGGCAGGCCAGACAGTTCACTGGATGGTCGGCGC
TTTTGTAAGAGAAAAGCACTTGAAGGATATCTAGCGCAATCTTCAGGGAGTGGTAGTTCT
AATTATATTCCTCTTGCTGATAATGTCTTATGGGATTCTGTACCTGCTCCTCCACATAGT
ATGAGTACAGGTGCAAATATCTCTGCTCCAACAGAAAGTAACAGAAGCATCAATATGTCA
GAGCAGGTGATCCCAAGACTTGGGCTTACCATGGGAGGAGCCGTTACGGAAACTCCTCTT
GATACACCGGCTTCAAGATCTCAGAGAAATTTCAGGGTGAGGATTAATGGCTCACCTCAG
CAAGATTATCTTCCTAGTAACCCCTTTCCTGCTGTGGATGATGTTGGAAATGTTAGTCTG
TCATCTGAACAGCAATTACCGGAGCTCCTTCCTAATATCTCTTTGGATTTGAGGTCTGTG
TCTGCTACAGATAGTGGAAATACTCAAAGGCAGCCTGTTGTAATGCATGTTCCTTCTCTG
CATCGACGTGCACAGGCTAGGTGGAATTCAGCATCAAGTTCAAGAACTGGCAGTTCATCA
AGTTTTTCTGGTGAGAGAAATTCAGCAATATTTGAAGAGCCTAACTCAAGAAGTGTGTCA
AGAAACATCTCACAACATCCTATATTCATACCTTCAACTGATGGGAGAAACTTGAACCAA
AATCCTGCCAACTGGAGTGTAGCTGGAAGAAATATCTCTGTTGCTGGAAATGTCGCATCC
ACATCTCGCAACAGCTCCAGTTCAGGGGTCCACACATCCTCTCCTAGGGTTCTCCACAGA
TCTCCTCAATATCAACGGAGACTGCAAGAATTAGTCCGTAGATCTTTGTTGTCTTCAGAT
GGCGCTGAATCTGGAGGTCATAGTGGTAATAATCGTCCACTACGTTTGAGTTCTGCTGTC
TCACAGGAGACGGCACTATCTGGAAACCATGAGCATCGTACATCGAGTTCAAGGTCAGCA
ATGATTTCGGAGCGACATCTTGATGGTGCTACCGGAGTCTCCTATCCCGGGAGGAATTTG
GCTGCTGCACGTGAACGAAGGAGCAGGGTAGTCACTGAGATTCGCAATGTGTTAGATCTT
ATGCGCAGGGGAGAGGGCCTAAGATTTGAGGATGTTATGATGCTTGATCAGTCAGTCTTC
TTTGGGATGCCGGATATTCATGATCACCATAGGGATATGCGGCTTGATGTTGATAATATG
ACATATGAGGAGTTACTGGCACTTGGGGAGCGCATTGGGGATGTTTGCACTGGGCTAACT
GAAGAAACTATTTTGAGTCGTTTGAAGCAGCGAAATTATATTTGCATAAAAACAGAAGAA
CCCGAGGATACAGAACCATGCTGCATATGTCGGGAAGAATATAATGATGGAGATGATGTT
GGAACACTGAATTGCGGCCACGACTTTCACGCTGGCTGCATTAAGCAATGGCTCATGCAG
AAGAATTTATGCCCGATTTGCAAAACAACAGGGCTGACTACGTGA

Peptide Sequence

PEP ID

XP_016497020.1
PEP Infomation

PREDICTED: E3 ubiquitin-protein ligase MBR2-like [Nicotiana tabacum]
Sequence

MQGRRSAFGSLQESLGFNHGSTSSDGGADQQICWNNDHAQNHLTDYMVSSNETNFPFFDP
VNQERHNVTGWSLGESSSSITPNCASRREQKTDHGWSSTMTTYPGPSHFCNEQQYGSSDI
LSLSNTEENLSSHRIDNSTLFSQGYSSSTIPHDINRNPVFEGHSDNNDDDDDCQVMECTP
YNPDRPGKEQKSSAASTSGTNGYLMDNSDGRPDSSLDGRRFCKRKALEGYLAQSSGSGSS
NYIPLADNVLWDSVPAPPHSMSTGANISAPTESNRSINMSEQVIPRLGLTMGGAVTETPL
DTPASRSQRNFRVRINGSPQQDYLPSNPFPAVDDVGNVSLSSEQQLPELLPNISLDLRSV
SATDSGNTQRQPVVMHVPSLHRRAQARWNSASSSRTGSSSSFSGERNSAIFEEPNSRSVS
RNISQHPIFIPSTDGRNLNQNPANWSVAGRNISVAGNVASTSRNSSSSGVHTSSPRVLHR
SPQYQRRLQELVRRSLLSSDGAESGGHSGNNRPLRLSSAVSQETALSGNHEHRTSSSRSA
MISERHLDGATGVSYPGRNLAAARERRSRVVTEIRNVLDLMRRGEGLRFEDVMMLDQSVF
FGMPDIHDHHRDMRLDVDNMTYEELLALGERIGDVCTGLTEETILSRLKQRNYICIKTEE
PEDTEPCCICREEYNDGDDVGTLNCGHDFHAGCIKQWLMQKNLCPICKTTGLTT

Transcript Sequence

Gene sequence data has not been registered.